CDS

Accession Number TCMCG023C29800
gbkey CDS
Protein Id PIM97431.1
Location complement(join(3312..3409,4862..5099,5191..5227,6676..6805,7355..7478,7747..7998))
Organism Handroanthus impetiginosus
locus_tag CDL12_30099

Protein

Length 292aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA324125, BioSample:SAMN05195323
db_source NKXS01009722.1
Definition putative RNA-binding protein SEB4 (RRM superfamily) [Handroanthus impetiginosus]
Locus_tag CDL12_30099

EGGNOG-MAPPER Annotation

COG_category A
Description RNA recognition motif
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000381        [VIEW IN EMBL-EBI]
GO:0001501        [VIEW IN EMBL-EBI]
GO:0001756        [VIEW IN EMBL-EBI]
GO:0001947        [VIEW IN EMBL-EBI]
GO:0002009        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003007        [VIEW IN EMBL-EBI]
GO:0003143        [VIEW IN EMBL-EBI]
GO:0003228        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003730        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007368        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0007507        [VIEW IN EMBL-EBI]
GO:0007517        [VIEW IN EMBL-EBI]
GO:0007519        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009792        [VIEW IN EMBL-EBI]
GO:0009799        [VIEW IN EMBL-EBI]
GO:0009855        [VIEW IN EMBL-EBI]
GO:0009887        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009895        [VIEW IN EMBL-EBI]
GO:0009896        [VIEW IN EMBL-EBI]
GO:0009952        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0010720        [VIEW IN EMBL-EBI]
GO:0010830        [VIEW IN EMBL-EBI]
GO:0010831        [VIEW IN EMBL-EBI]
GO:0014706        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016202        [VIEW IN EMBL-EBI]
GO:0017091        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031330        [VIEW IN EMBL-EBI]
GO:0031331        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035050        [VIEW IN EMBL-EBI]
GO:0035239        [VIEW IN EMBL-EBI]
GO:0035282        [VIEW IN EMBL-EBI]
GO:0035295        [VIEW IN EMBL-EBI]
GO:0035925        [VIEW IN EMBL-EBI]
GO:0036002        [VIEW IN EMBL-EBI]
GO:0043009        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0043487        [VIEW IN EMBL-EBI]
GO:0043488        [VIEW IN EMBL-EBI]
GO:0043489        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0045597        [VIEW IN EMBL-EBI]
GO:0045661        [VIEW IN EMBL-EBI]
GO:0045663        [VIEW IN EMBL-EBI]
GO:0045844        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048024        [VIEW IN EMBL-EBI]
GO:0048255        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048562        [VIEW IN EMBL-EBI]
GO:0048568        [VIEW IN EMBL-EBI]
GO:0048598        [VIEW IN EMBL-EBI]
GO:0048634        [VIEW IN EMBL-EBI]
GO:0048636        [VIEW IN EMBL-EBI]
GO:0048641        [VIEW IN EMBL-EBI]
GO:0048643        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048701        [VIEW IN EMBL-EBI]
GO:0048702        [VIEW IN EMBL-EBI]
GO:0048704        [VIEW IN EMBL-EBI]
GO:0048705        [VIEW IN EMBL-EBI]
GO:0048706        [VIEW IN EMBL-EBI]
GO:0048729        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050779        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051147        [VIEW IN EMBL-EBI]
GO:0051149        [VIEW IN EMBL-EBI]
GO:0051153        [VIEW IN EMBL-EBI]
GO:0051155        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051495        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060284        [VIEW IN EMBL-EBI]
GO:0060297        [VIEW IN EMBL-EBI]
GO:0060298        [VIEW IN EMBL-EBI]
GO:0060429        [VIEW IN EMBL-EBI]
GO:0060537        [VIEW IN EMBL-EBI]
GO:0060538        [VIEW IN EMBL-EBI]
GO:0060562        [VIEW IN EMBL-EBI]
GO:0061013        [VIEW IN EMBL-EBI]
GO:0061014        [VIEW IN EMBL-EBI]
GO:0061053        [VIEW IN EMBL-EBI]
GO:0061061        [VIEW IN EMBL-EBI]
GO:0061157        [VIEW IN EMBL-EBI]
GO:0061158        [VIEW IN EMBL-EBI]
GO:0061371        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072358        [VIEW IN EMBL-EBI]
GO:0072359        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097157        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0110020        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901861        [VIEW IN EMBL-EBI]
GO:1901863        [VIEW IN EMBL-EBI]
GO:1902115        [VIEW IN EMBL-EBI]
GO:1902117        [VIEW IN EMBL-EBI]
GO:1902369        [VIEW IN EMBL-EBI]
GO:1902373        [VIEW IN EMBL-EBI]
GO:1902809        [VIEW IN EMBL-EBI]
GO:1902811        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902905        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903312        [VIEW IN EMBL-EBI]
GO:1903313        [VIEW IN EMBL-EBI]
GO:1904888        [VIEW IN EMBL-EBI]
GO:1905868        [VIEW IN EMBL-EBI]
GO:1905870        [VIEW IN EMBL-EBI]
GO:1990715        [VIEW IN EMBL-EBI]
GO:1990825        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000736        [VIEW IN EMBL-EBI]
GO:2000738        [VIEW IN EMBL-EBI]
GO:2000765        [VIEW IN EMBL-EBI]
GO:2000766        [VIEW IN EMBL-EBI]
GO:2001014        [VIEW IN EMBL-EBI]
GO:2001016        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTTATCAGCAGCAGCAGCAGCAGCAGCAGCTGCCGATACCTGGTCCAAGCTCGGGCTCTGGTCAGGGTGGATTTCAGTATATGAATTCTCCATTTGGGGACACGACCTTCACTAAGGTTTTTGTCGGAGGTTTGGCTTGGGAGACCCAGAGTGAGACCATGAGACGCTATTTTGAGCAATTCGGAGAGATTCTTGAGGCGGTGGTCATCACCGATAAGAATACTGGCCGATCCAAAGGATACGGTTTTGTGACTTTCCGGGATCCTGATTCAGCAAGGAGAGCTTGTGCAGATCCCACTCCAATTATTGATGGGAGGCGAGCAAATTGTAATTTGGCTTCACTTGGGAGACCCCGGCCAGCAGTTCCTTTTGGACGCCTTAGATCTCCAGCACCTTACCTTGGAGGCTTGCCAGCGGCTAGGGGTGCTTACATTGGAAATTTTGCCTACCAGCAACCTGTTACTTATGGATTTCAACAAGGCTTGATGTATTCTCCATATGGATATGCTGCATACAATCCAGAATATGGGTATCCTCAGGGTCTTTACAGTCCTTATGGAAGTCAGCAATACCTTCACATATATGGTGTGCCTGGAACAGTTAGCACGACTATGTACCCTTATAGCCAGTTGAGCCAGGCTATTCCAGGAAGTCATAGTTACACTGCATTGCCAGGATATGCGATGCCTGGTCATCAGATAGTGCAATTTGGTGGGCCCAGTGTCAATGCAATTACAACCACTTCTGTTCCAACAATTCCAGCACCATATCCTGGAGGGGTGGCAACACCTATTCCACAACAGCCACAATTCATACTACCTGCGCATTCGCCTCAATTCATGCCTGGTAGCGGTTCTGACCAAAATGCTGGGTGA
Protein:  
MAYQQQQQQQQLPIPGPSSGSGQGGFQYMNSPFGDTTFTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPDSARRACADPTPIIDGRRANCNLASLGRPRPAVPFGRLRSPAPYLGGLPAARGAYIGNFAYQQPVTYGFQQGLMYSPYGYAAYNPEYGYPQGLYSPYGSQQYLHIYGVPGTVSTTMYPYSQLSQAIPGSHSYTALPGYAMPGHQIVQFGGPSVNAITTTSVPTIPAPYPGGVATPIPQQPQFILPAHSPQFMPGSGSDQNAG